EnhancerDB
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  3. rs142549342[chr1:201575099]
Enhancers that have rs142549342[chr1:201575099]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201559168 201580562 enh12524
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Breast Thyroid Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs142549342[chr1:201575099]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201570153 201579304 ZNF274 GTRD no Bone Marrow (K562) 107856725
chr1 201575010 201575486 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365179
chr1 201575088 201575109 ZNF263 JASPAR yes 34512589
chr1 201575091 201575112 ZNF263 JASPAR yes 34512590
chr1 201575092 201575107 PRDM1 JASPAR yes 34512591
chr1 201575093 201575104 E2F6 JASPAR yes 34512592
chr1 201575094 201575115 IRF1 JASPAR yes 34512593
chr1 201575095 201575116 ZNF263 JASPAR yes 34512594
chr1 201575096 201575117 ZNF263 JASPAR yes 34512595
chr1 201575098 201575112 SPI1 JASPAR yes 34512596
chr1 201575098 201575112 SPIC JASPAR yes 34512597
chr1 201575098 201575113 STAT2 JASPAR yes 34512598
chr1 201575099 201575112 ELF1 JASPAR yes 34512599
chr1 201575099 201575120 ZNF263 JASPAR yes 34512600
Genes associated with rs142549342[chr1:201575099], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More