EnhancerDB
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  3. rs142558940[chr1:172508058]
Enhancers that have rs142558940[chr1:172508058]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172503525 172518495 enh728
Prostate (PC-3) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Neural Stem Cells (H9) Stomach
Transcript factors that have rs142558940[chr1:172508058]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172508051 172508061 NKX2-3 JASPAR yes 33135818
chr1 172508052 172508061 NKX2-8 JASPAR yes 33135819
chr1 172508056 172508073 NR3C1 JASPAR yes 33135820
chr1 172508056 172508073 NR3C2 JASPAR yes 33135821
Genes associated with rs142558940[chr1:172508058], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More