EnhancerDB
  1. Home
  2. SNP
  3. rs142564429[chr1:43939602]
Enhancers that have rs142564429[chr1:43939602]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43924725 43950195 enh11811
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Stomach
Transcript factors that have rs142564429[chr1:43939602]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43939589 43939603 ONECUT3 JASPAR yes 28497986
chr1 43939590 43939605 FOXA1 JASPAR yes 28497987
chr1 43939591 43939602 FOXB1 JASPAR yes 28497988
chr1 43939591 43939602 FOXC1 JASPAR yes 28497989
chr1 43939591 43939603 FOXC2 JASPAR yes 28497990
chr1 43939592 43939604 FOXI1 JASPAR yes 28497991
chr1 43939599 43939604 GATA2 JASPAR yes 28497992
Genes associated with rs142564429[chr1:43939602], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More