EnhancerDB
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  3. rs142580654[chr1:167232868]
Enhancers that have rs142580654[chr1:167232868]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 167228665 167248455 enh705
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Lung (A549) Blood (GM12878) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Pancreas (Panc1) Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs142580654[chr1:167232868]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 167232859 167232877 NFYA JASPAR yes 32855201
chr1 167232860 167232870 ERF JASPAR yes 32855202
chr1 167232865 167232880 NFYB JASPAR yes 32855203
chr1 167232867 167232872 NFY TRANSFAC yes 32855204
Genes associated with rs142580654[chr1:167232868], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More