EnhancerDB
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  3. rs142588859[chr1:39427872]
Enhancers that have rs142588859[chr1:39427872]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39414298 39432055 enh11754
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs142588859[chr1:39427872]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39427854 39427875 ZNF263 JASPAR yes 28244640
chr1 39427864 39427879 ESR2 JASPAR yes 28244642
chr1 39427864 39427884 ESR1 JASPAR yes 28244643
chr1 39427872 39427884 GLI2 JASPAR yes 28244644
chr1 39427872 39427887 RUNX2 JASPAR yes 28244645
Genes associated with rs142588859[chr1:39427872], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More