EnhancerDB
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  3. rs142592666[chr1:222019005]
Enhancers that have rs142592666[chr1:222019005]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 221995465 222021667 enh12697
Liver Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs142592666[chr1:222019005]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 222018999 222019013 TCF7L2 JASPAR yes 35574938
chr1 222018999 222019014 LEF1 JASPAR yes 35574939
chr1 222019003 222019009 TCF1 TRANSFAC yes 35574940
Genes associated with rs142592666[chr1:222019005], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More