EnhancerDB
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  3. rs142611652[chr16:28104327]
Enhancers that have rs142611652[chr16:28104327]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 28098765 28106942 enh16617
Skin (Keratinocyte) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Placenta Colon (HCT116) Thyroid Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs142611652[chr16:28104327]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 28104314 28104327 TFAP2A JASPAR yes 10217275
chr16 28104314 28104327 TFAP2B JASPAR yes 10217276
chr16 28104314 28104327 TFAP2C JASPAR yes 10217277
chr16 28104314 28104328 EBF1 JASPAR yes 10217278
chr16 28104315 28104328 TFAP2A JASPAR yes 10217279
chr16 28104315 28104328 TFAP2B JASPAR yes 10217280
chr16 28104315 28104328 TFAP2C JASPAR yes 10217281
chr16 28104315 28104330 TFAP2C JASPAR yes 10217282
chr16 28104316 28104327 EBF1 JASPAR yes 10217283
chr16 28104323 28104337 JUN JASPAR yes 10217284
chr16 28104325 28104336 BATF JASPAR yes 10217285
chr16 28104327 28104338 FOS JASPAR yes 10217286
chr16 28104327 28104338 FOSL1 JASPAR yes 10217287
chr16 28104327 28104338 JUND JASPAR yes 10217288
Genes associated with rs142611652[chr16:28104327], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More