EnhancerDB
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  3. rs1426374[chr12:110552773]
Enhancers that have rs1426374[chr12:110552773]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 110527065 110555975 enh2590
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs1426374[chr12:110552773]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 110550988 110553161 ZBTB33 GTRD no Lung (A549) 21572676
chr12 110551423 110552929 ZBTB33 GTRD no Lung (A549) 21572680
chr12 110551734 110552919 ZNF274 GTRD no Cervix (HeLa-S3) 21572681
chr12 110551787 110553008 ZNF143 GTRD no Epithelial (MCF-7) 21572683
chr12 110551839 110552912 ZNF143 GTRD no Epithelial (MCF-7) 21572686
chr12 110551865 110552948 ZNF274 GTRD no Cervix (HeLa-S3) 21572687
chr12 110551881 110552943 ZNF274 GTRD no Bone Marrow (K562) 21572689
chr12 110551884 110552797 ZNF274 GTRD no Liver (HepG2) 21572690
chr12 110551902 110552920 ZBTB33 GTRD no Lung (A549) 21572692
chr12 110551953 110552783 ZNF143 GTRD no Epithelial (MCF-7) 21572695
chr12 110551994 110552779 ZNF274 GTRD no Bone Marrow (K562) 21572700
chr12 110552000 110552801 ZNF274 GTRD no Liver (HepG2) 21572702
chr12 110552026 110552781 ZNF143 GTRD no Epithelial (MCF-7) 21572706
chr12 110552096 110552880 ZNF274 GTRD no Bone Marrow (K562) 21572713
chr12 110552159 110552796 ZBTB33 GTRD no Lung (A549) 21572720
chr12 110552761 110552775 PLAG1 JASPAR yes 123677835
chr12 110552767 110552778 E2F1 JASPAR yes 123677836
chr12 110552768 110552773 SP1 TRANSFAC yes 123677837
chr12 110552768 110552779 E2F4 JASPAR yes 123677838
chr12 110552768 110552779 E2F6 JASPAR yes 123677839
chr12 110552769 110552774 SP1 TRANSFAC yes 123677840
Genes associated with rs1426374[chr12:110552773], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More