EnhancerDB
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  3. rs142669908[chr1:201619646]
Enhancers that have rs142669908[chr1:201619646]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201600540 201629395 enh12525
Brain (SK-N-SH) Large Intestine Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Thyroid Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Uterus Heart
chr1 201619383 201619798 vista4569
VISTA
Transcript factors that have rs142669908[chr1:201619646]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201617825 201620050 ZNF274 GTRD no Bone Marrow (K562) 107856787
chr1 201617825 201620050 ZNF274 GTRD no Bone Marrow (K562) 107856788
chr1 201619073 201619991 POLR2A UCSC Txn Factor no Conserved 107856800
chr1 201619073 201619991 POLR2A UCSC Txn Factor no Conserved 107856801
chr1 201619123 201619858 E2F1 UCSC Txn Factor no Conserved 107856804
chr1 201619123 201619858 E2F1 UCSC Txn Factor no Conserved 107856805
chr1 201619173 201619683 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856806
chr1 201619173 201619683 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856807
chr1 201619202 201619858 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107856810
chr1 201619202 201619858 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107856811
chr1 201619216 201619706 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21365182
chr1 201619216 201619706 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107856812
chr1 201619216 201619706 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107856813
chr1 201619223 201619847 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856815
chr1 201619223 201619847 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856816
chr1 201619346 201619782 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856817
chr1 201619356 201620397 ZBTB33 GTRD no Lung (A549) 107856818
chr1 201619423 201619712 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21365183
chr1 201619423 201619712 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107856819
chr1 201619444 201619848 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856820
chr1 201619479 201619815 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 107856821
chr1 201619483 201619739 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107856822
chr1 201619484 201619854 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856823
chr1 201619493 201619703 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107856824
chr1 201619506 201619816 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107856825
chr1 201619550 201619977 ZNF143 GTRD no Epithelial (MCF-7) 107856826
chr1 201619553 201619877 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856827
chr1 201619555 201619965 ZNF143 GTRD no Epithelial (MCF-7) 107856828
chr1 201619556 201619836 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856829
chr1 201619557 201619837 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107856830
chr1 201619568 201619947 ZNF143 GTRD no Epithelial (MCF-7) 107856831
chr1 201619571 201619910 ZNF143 GTRD no Epithelial (MCF-7) 107856832
chr1 201619600 201619962 TCF7L2 GTRD no Colon (HCT116) 107856833
chr1 201619625 201619875 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21365184
chr1 201619625 201619875 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107856834
chr1 201619639 201619966 ZNF274 GTRD no Liver (HepG2) 107856835
chr1 201619645 201619654 THAP1 JASPAR yes 34517084
chr1 201619645 201619654 THAP1 JASPAR yes 118432599
Genes associated with rs142669908[chr1:201619646], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More