EnhancerDB
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  3. rs142701941[chr10:33439452]
Enhancers that have rs142701941[chr10:33439452]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 33437669 33448583 enh1173
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Ovary Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs142701941[chr10:33439452]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 33439439 33439454 MEF2A JASPAR yes 126577535
chr10 33439440 33439452 MEF2A JASPAR yes 126577536
chr10 33439440 33439452 MEF2B JASPAR yes 126577537
chr10 33439440 33439452 MEF2D JASPAR yes 126577538
chr10 33439442 33439452 ALX3 JASPAR yes 126577541
chr10 33439442 33439452 GSX2 JASPAR yes 126577542
chr10 33439442 33439452 MNX1 JASPAR yes 126577543
chr10 33439443 33439456 DUXA JASPAR yes 126577552
chr10 33439444 33439455 DUX4 JASPAR yes 126577553
chr10 33439444 33439455 PHOX2A JASPAR yes 126577554
chr10 33439444 33439455 PROP1 JASPAR yes 126577555
Genes associated with rs142701941[chr10:33439452], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More