EnhancerDB
  1. Home
  2. SNP
  3. rs142716927[chr1:48960817]
Enhancers that have rs142716927[chr1:48960817]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 48956205 48969115 enh11841
Liver (HepG2) Brain (SK-N-MC) Large Intestine Astrocyte Bone (Osteoblast) Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs142716927[chr1:48960817]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 48960815 48960827 PKNOX1 JASPAR yes 28742674
chr1 48960815 48960827 PKNOX2 JASPAR yes 28742675
chr1 48960815 48960827 TGIF1 JASPAR yes 28742676
chr1 48960815 48960827 TGIF2 JASPAR yes 28742677
Genes associated with rs142716927[chr1:48960817], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More