EnhancerDB
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  3. rs142728025[chr6:41688217]
Enhancers that have rs142728025[chr6:41688217]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 41672005 41699742 enh9103
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs142728025[chr6:41688217]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 41688215 41688226 FLI1 JASPAR yes 101669124
chr6 41688215 41688228 ELF3 JASPAR yes 101669125
chr6 41688216 41688226 ERF JASPAR yes 101669126
chr6 41688216 41688226 ETV6 JASPAR yes 101669127
chr6 41688216 41688227 ELF5 JASPAR yes 101669128
chr6 41688216 41688228 EHF JASPAR yes 101669129
chr6 41688216 41688229 ELF1 JASPAR yes 101669130
chr6 41688217 41688224 SPI1 JASPAR yes 101669131
chr6 41688217 41688225 EHF JASPAR yes 101669132
chr6 41688217 41688225 FEV JASPAR yes 101669133
Genes associated with rs142728025[chr6:41688217], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More