EnhancerDB
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  3. rs142772272[chr17:57513181]
Enhancers that have rs142772272[chr17:57513181]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57510669 57520490 enh4503
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Esophagus Astrocyte Lung Blood (GM12878) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs142772272[chr17:57513181]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57513026 57515484 ZNF143 GTRD no Epithelial (MCF-7) 21775084
chr17 57513026 57515484 ZNF143 GTRD no Epithelial (MCF-7) 108276055
chr17 57513035 57515360 ZNF143 GTRD no Epithelial (MCF-7) 21775085
chr17 57513035 57515360 ZNF143 GTRD no Epithelial (MCF-7) 108276056
chr17 57513050 57513310 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21775086
chr17 57513070 57513300 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21775087
chr17 57513078 57514320 ZNF143 GTRD no Epithelial (MCF-7) 21775088
chr17 57513092 57513342 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21775089
chr17 57513104 57514221 ZNF143 GTRD no Epithelial (MCF-7) 21775090
chr17 57513115 57513305 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21775091
chr17 57513119 57515431 ZNF143 GTRD no Epithelial (MCF-7) 21775092
chr17 57513119 57515431 ZNF143 GTRD no Epithelial (MCF-7) 108276057
chr17 57513152 57514174 ZNF143 GTRD no Epithelial (MCF-7) 21775093
chr17 57513160 57514311 ZNF143 GTRD no Epithelial (MCF-7) 21775094
chr17 57513169 57513185 SOX4 JASPAR yes 55060121
chr17 57513172 57514108 ZNF143 GTRD no Epithelial (MCF-7) 21775095
chr17 57513177 57513192 MYBL2 JASPAR yes 55060122
chr17 57513180 57513195 HNF1A JASPAR yes 55060123
chr17 57513181 57513193 HNF1B JASPAR yes 55060124
chr17 57513181 57513194 HNF1B JASPAR yes 55060125
Genes associated with rs142772272[chr17:57513181], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More