EnhancerDB
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  3. rs142776139[chr5:95986899]
Enhancers that have rs142776139[chr5:95986899]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 95960609 95996255 enh22445
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Blood (T-cell) Epithelial (MCF-7)
chr5 95986710 95987017 vista48546
VISTA
Transcript factors that have rs142776139[chr5:95986899]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 95986889 95986900 TFAP2C JASPAR yes 64461263
chr5 95986889 95986900 TFAP2C JASPAR yes 70687236
chr5 95986890 95986899 TFAP2A JASPAR yes 64461264
chr5 95986890 95986899 TFAP2A JASPAR yes 70687237
chr5 95986896 95986915 RFX2 JASPAR yes 64461265
chr5 95986896 95986915 RFX2 JASPAR yes 70687238
chr5 95986898 95986913 RFX5 JASPAR yes 64461266
chr5 95986898 95986913 RFX5 JASPAR yes 70687239
Genes associated with rs142776139[chr5:95986899], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More