EnhancerDB
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  3. rs142794262[chr17:46566867]
Enhancers that have rs142794262[chr17:46566867]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 46553725 46585590 enh4456
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs142794262[chr17:46566867]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 46566849 46566870 IRF1 JASPAR yes 54589162
chr17 46566853 46566868 PRDM1 JASPAR yes 54589164
chr17 46566853 46566868 STAT2 JASPAR yes 54589165
chr17 46566865 46566869 YY1 TRANSFAC yes 54589166
Genes associated with rs142794262[chr17:46566867], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More