EnhancerDB
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  3. rs142824499[chr12:47617770]
Enhancers that have rs142824499[chr12:47617770]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 47604098 47625535 enh2315
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs142824499[chr12:47617770]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 47617760 47617775 HNF4G JASPAR yes 120686171
chr12 47617760 47617775 NR2C2 JASPAR yes 120686172
chr12 47617761 47617775 NR2F1 JASPAR yes 120686173
chr12 47617761 47617776 HNF4A JASPAR yes 120686174
Genes associated with rs142824499[chr12:47617770], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 46751972 46766650 - SLC38A2 ENSG00000134294.9 46766650 851120 Heart 0.130398 11976
chr12 46751972 46766650 - SLC38A2 ENSG00000134294.9 46766650 851120 Spleen 0.435647 11976