EnhancerDB
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  3. rs142838580[chr6:110850626]
Enhancers that have rs142838580[chr6:110850626]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 110836885 110871534 enh23506
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs142838580[chr6:110850626]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 110850626 110850645 CTCF JASPAR yes 104294349
Genes associated with rs142838580[chr6:110850626], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More