EnhancerDB
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  3. rs142850073[chr19:3365138]
Enhancers that have rs142850073[chr19:3365138]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3362205 3392371 enh17862
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Cervix (HeLa-S3) Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs142850073[chr19:3365138]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3363674 3370675 ZNF274 GTRD no Bone Marrow (K562) 21838836
chr19 3363674 3370675 ZNF274 GTRD no Bone Marrow (K562) 108366108
chr19 3363674 3370675 ZNF274 GTRD no Bone Marrow (K562) 108366109
chr19 3363879 3369712 ZBTB33 GTRD no Lung (A549) 21838837
chr19 3363879 3369712 ZBTB33 GTRD no Lung (A549) 108366110
chr19 3363879 3369712 ZBTB33 GTRD no Lung (A549) 108366111
chr19 3363921 3370125 ZNF274 GTRD no Bone Marrow (K562) 21838838
chr19 3363921 3370125 ZNF274 GTRD no Bone Marrow (K562) 108366112
chr19 3363921 3370125 ZNF274 GTRD no Bone Marrow (K562) 108366113
chr19 3364060 3371907 ZNF274 GTRD no Bone Marrow (K562) 21838839
chr19 3364060 3371907 ZNF274 GTRD no Bone Marrow (K562) 108366114
chr19 3364060 3371907 ZNF274 GTRD no Bone Marrow (K562) 108366115
chr19 3364200 3370086 ZBTB33 GTRD no Lung (A549) 21838840
chr19 3364200 3370086 ZBTB33 GTRD no Lung (A549) 108366116
chr19 3364200 3370086 ZBTB33 GTRD no Lung (A549) 108366117
chr19 3364451 3371976 ZNF274 GTRD no Blood (GM12878) 21838841
chr19 3364451 3371976 ZNF274 GTRD no Blood (GM12878) 108366118
chr19 3364451 3371976 ZNF274 GTRD no Blood (GM12878) 108366119
chr19 3364564 3368495 ZBTB33 GTRD no Lung (A549) 21838842
chr19 3364564 3368495 ZBTB33 GTRD no Lung (A549) 108366120
chr19 3364778 3368625 ZNF274 GTRD no Blood (GM12878) 21838843
chr19 3364778 3368625 ZNF274 GTRD no Blood (GM12878) 108366121
chr19 3364786 3368521 ZBTB33 GTRD no Lung (A549) 21838844
chr19 3364786 3368521 ZBTB33 GTRD no Lung (A549) 108366122
chr19 3364794 3371972 ZNF274 GTRD no Blood (GM12878) 21838845
chr19 3364794 3371972 ZNF274 GTRD no Blood (GM12878) 108366123
chr19 3364794 3371972 ZNF274 GTRD no Blood (GM12878) 108366124
chr19 3364848 3371994 ZNF274 GTRD no Blood (GM12878) 21838846
chr19 3364848 3371994 ZNF274 GTRD no Blood (GM12878) 108366125
chr19 3364848 3371994 ZNF274 GTRD no Blood (GM12878) 108366126
chr19 3364879 3368587 ZNF274 GTRD no Cervix (HeLa-S3) 21838847
chr19 3364879 3368587 ZNF274 GTRD no Cervix (HeLa-S3) 108366127
chr19 3364897 3367495 ZNF143 GTRD no Epithelial (MCF-7) 21838848
chr19 3364897 3367495 ZNF143 GTRD no Epithelial (MCF-7) 108366128
chr19 3364907 3367833 ZBTB33 GTRD no Lung (A549) 21838849
chr19 3364907 3367833 ZBTB33 GTRD no Lung (A549) 108366129
chr19 3364939 3368135 TCF7L2 GTRD no Colon (HCT116) 21838850
chr19 3364939 3368135 TCF7L2 GTRD no Colon (HCT116) 108366130
chr19 3364993 3368787 ZNF274 GTRD no Bone Marrow (K562) 21838851
chr19 3364993 3368787 ZNF274 GTRD no Bone Marrow (K562) 108366131
chr19 3365017 3369026 TCF7L2 GTRD no Colon (HCT116) 21838852
chr19 3365017 3369026 TCF7L2 GTRD no Colon (HCT116) 108366132
chr19 3365130 3365140 GABPA JASPAR yes 112123051
chr19 3365132 3365138 ETS1 JASPAR yes 112123052
chr19 3365132 3365138 SPI1 JASPAR yes 112123053
Genes associated with rs142850073[chr19:3365138], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More