EnhancerDB
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  3. rs142856457[chr17:80235403]
Enhancers that have rs142856457[chr17:80235403]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80234785 80270055 enh4646
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs142856457[chr17:80235403]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80235393 80235410 RARA JASPAR yes 56356402
chr17 80235393 80235410 RXRA JASPAR yes 56356403
chr17 80235400 80235408 USF1 TRANSFAC yes 56356404
chr17 80235400 80235413 NR2F1 JASPAR yes 56356405
chr17 80235403 80235411 NR4A2 JASPAR yes 56356406
Genes associated with rs142856457[chr17:80235403], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More