EnhancerDB
  1. Home
  2. SNP
  3. rs142880970[chr16:88275198]
Enhancers that have rs142880970[chr16:88275198]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88258045 88283355 enh32027
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Brain (SK-N-SH) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs142880970[chr16:88275198]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88273658 88275261 TEF1 GTRD no Bone (Osteoblast) 21735591
chr16 88274701 88275379 ZBTB33 GTRD no Brain (SK-N-SH) 21735594
chr16 88274737 88275417 ZBTB33 GTRD no Brain (SK-N-SH) 21735595
chr16 88274765 88275336 ZBTB33 GTRD no Brain (SK-N-SH) 21735596
chr16 88274994 88275408 MYOD GTRD no Muscle (Myoblast) 21735597
chr16 88275194 88275198 H4TF2 TRANSFAC yes 12269965
Genes associated with rs142880970[chr16:88275198], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More