EnhancerDB
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  3. rs142953656[chr16:85188996]
Enhancers that have rs142953656[chr16:85188996]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85155669 85199515 enh16863
Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142953656[chr16:85188996]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85188521 85189007 ZNF143 GTRD no Epithelial (MCF-7) 21720427
chr16 85188588 85189795 ZNF143 GTRD no Epithelial (MCF-7) 21720428
chr16 85188621 85189435 ZNF143 GTRD no Epithelial (MCF-7) 21720429
chr16 85188666 85189421 ZNF143 GTRD no Epithelial (MCF-7) 21720430
chr16 85188673 85189241 ZNF143 GTRD no Epithelial (MCF-7) 21720431
chr16 85188674 85189701 ZNF274 GTRD no Liver (HepG2) 21720432
chr16 85188696 85189135 ZNF274 GTRD no Liver (HepG2) 21720433
chr16 85188722 85189641 ZNF143 GTRD no Epithelial (MCF-7) 21720434
chr16 85188756 85189232 ZNF274 GTRD no Liver (HepG2) 21720435
chr16 85188762 85189309 ZNF274 GTRD no Liver (HepG2) 21720436
chr16 85188777 85189164 ZNF143 GTRD no Epithelial (MCF-7) 21720437
chr16 85188784 85189407 ZNF274 GTRD no Liver (HepG2) 21720438
chr16 85188809 85189080 ZNF274 GTRD no Liver (HepG2) 21720439
chr16 85188835 85189183 ZNF143 GTRD no Epithelial (MCF-7) 21720440
chr16 85188835 85189727 ZNF274 GTRD no Cervix (HeLa-S3) 21720441
chr16 85188847 85189180 ZNF274 GTRD no Liver (HepG2) 21720442
chr16 85188854 85189648 ZNF143 GTRD no Epithelial (MCF-7) 21720443
chr16 85188867 85189139 ZNF143 GTRD no Epithelial (MCF-7) 21720444
chr16 85188887 85189327 ZNF274 GTRD no Cervix (HeLa-S3) 21720445
Genes associated with rs142953656[chr16:85188996], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 85204882 85218969 + CTC-786C10.1 ENSG00000262601.1 85204882 15886 Heart 0.368994 15129