EnhancerDB
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  3. rs142958409[chr1:41964230]
Enhancers that have rs142958409[chr1:41964230]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41956025 41971975 enh11789
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Muscle (A673) Heart
Transcript factors that have rs142958409[chr1:41964230]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41964213 41964234 MAFG JASPAR yes 28395793
chr1 41964219 41964230 FOSL2 JASPAR yes 28395803
chr1 41964219 41964230 JUNB JASPAR yes 28395804
chr1 41964219 41964230 NFE2L2 JASPAR yes 28395805
chr1 41964219 41964233 JUN JASPAR yes 28395806
Genes associated with rs142958409[chr1:41964230], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More