EnhancerDB
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  3. rs142963134[chr1:228961858]
Enhancers that have rs142963134[chr1:228961858]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228960005 228980255 enh12752
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Cervix (HeLa-S3) Stomach Placenta Colon (HCT116) Breast Thyroid Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
chr1 228961848 228962129 vista5431
VISTA
Transcript factors that have rs142963134[chr1:228961858]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228961850 228961863 EOMES JASPAR yes 35932410
chr1 228961850 228961863 EOMES JASPAR yes 118474668
chr1 228961852 228961862 TBR1 JASPAR yes 35932411
chr1 228961852 228961862 TBR1 JASPAR yes 118474669
chr1 228961852 228961863 TBX2 JASPAR yes 35932412
chr1 228961852 228961863 TBX2 JASPAR yes 118474670
chr1 228961854 228961862 MGA JASPAR yes 35932413
chr1 228961854 228961862 MGA JASPAR yes 118474671
Genes associated with rs142963134[chr1:228961858], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More