EnhancerDB
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  3. rs142963483[chr6:17909170]
Enhancers that have rs142963483[chr6:17909170]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 17902765 17917095 enh23087
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Muscle (A673) Placenta Colon (HCT116) Thyroid Adrenal Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus
Transcript factors that have rs142963483[chr6:17909170]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 17909161 17909173 YY1 JASPAR yes 100404479
chr6 17909162 17909177 ESR2 JASPAR yes 100404480
chr6 17909162 17909182 ESR1 JASPAR yes 100404481
chr6 17909164 17909179 FOXA1 JASPAR yes 100404482
chr6 17909167 17909178 FOXB1 JASPAR yes 100404483
chr6 17909167 17909178 FOXC1 JASPAR yes 100404484
chr6 17909167 17909180 NR2F1 JASPAR yes 100404485
chr6 17909168 17909179 FOXA1 JASPAR yes 100404486
chr6 17909169 17909180 ESRRA JASPAR yes 100404487
chr6 17909169 17909180 ESRRB JASPAR yes 100404488
chr6 17909170 17909178 NR4A2 JASPAR yes 100404489
Genes associated with rs142963483[chr6:17909170], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More