EnhancerDB
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  3. rs142965871[chr12:69403327]
Enhancers that have rs142965871[chr12:69403327]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 69398794 69405361 enh14817
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
chr12 69403025 69403359 vista13943
VISTA
Transcript factors that have rs142965871[chr12:69403327]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 69403056 69403383 SOX2 GTRD no Neural Stem Cells (H9) 108043782
chr12 69403123 69403480 SOX2 GTRD no Neural Stem Cells (H9) 108043783
chr12 69403320 69403341 IRF1 JASPAR yes 82430013
chr12 69403320 69403341 IRF1 JASPAR yes 121696695
chr12 69403322 69403337 AR JASPAR yes 82430014
chr12 69403322 69403337 AR JASPAR yes 121696696
chr12 69403326 69403347 IRF1 JASPAR yes 82430015
chr12 69403326 69403347 IRF1 JASPAR yes 121696697
Genes associated with rs142965871[chr12:69403327], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More