EnhancerDB
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  3. rs142990976[chr1:54151321]
Enhancers that have rs142990976[chr1:54151321]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54142285 54153175 enh26712
Brain (SK-N-SH) Large Intestine Astrocyte Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas (Panc1) Uterus Stomach
chr1 54150852 54151742 vista1624
VISTA
Transcript factors that have rs142990976[chr1:54151321]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54150733 54151498 ZNF274 GTRD no Bone Marrow (K562) 107804217
chr1 54150802 54151398 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107804218
chr1 54150802 54151398 TCF7L2 UCSC Txn Factor no Conserved 107804219
chr1 54150890 54151517 ZNF274 GTRD no Bone Marrow (K562) 107804220
chr1 54150940 54151392 ZNF274 GTRD no Bone Marrow (K562) 107804221
chr1 54151313 54151325 PKNOX1 JASPAR yes 28946734
chr1 54151313 54151325 PKNOX2 JASPAR yes 28946735
chr1 54151313 54151325 TGIF1 JASPAR yes 28946736
chr1 54151313 54151325 TGIF2 JASPAR yes 28946737
chr1 54151313 54151325 PKNOX1 JASPAR yes 118291465
chr1 54151313 54151325 PKNOX2 JASPAR yes 118291466
chr1 54151313 54151325 TGIF1 JASPAR yes 118291467
chr1 54151313 54151325 TGIF2 JASPAR yes 118291468
chr1 54151314 54151324 MYF6 JASPAR yes 28946738
chr1 54151314 54151324 MYF6 JASPAR yes 118291469
chr1 54151318 54151330 IRF1 JASPAR yes 28946739
chr1 54151318 54151330 IRF1 JASPAR yes 118291470
chr1 54151319 54151323 NFE TRANSFAC yes 28946740
chr1 54151319 54151323 NFE TRANSFAC yes 118291471
Genes associated with rs142990976[chr1:54151321], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More