EnhancerDB
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  3. rs143050025[chr5:80258679]
Enhancers that have rs143050025[chr5:80258679]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 80257280 80276995 enh8523
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Lung Muscle (A673) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Uterus Blood (T-cell) Stomach
Transcript factors that have rs143050025[chr5:80258679]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 80258660 80258681 IRF1 JASPAR yes 63739144
chr5 80258672 80258682 HOXA13 JASPAR yes 63739148
chr5 80258672 80258682 HOXC10 JASPAR yes 63739149
chr5 80258672 80258682 HOXD11 JASPAR yes 63739150
chr5 80258672 80258682 HOXD13 JASPAR yes 63739151
chr5 80258672 80258683 HOXA10 JASPAR yes 63739152
chr5 80258672 80258683 HOXC11 JASPAR yes 63739153
chr5 80258672 80258683 HOXC12 JASPAR yes 63739154
chr5 80258672 80258683 HOXC13 JASPAR yes 63739155
chr5 80258672 80258683 HOXD12 JASPAR yes 63739156
chr5 80258673 80258682 CDX1 JASPAR yes 63739157
chr5 80258673 80258684 CDX2 JASPAR yes 63739158
chr5 80258677 80258688 NFE2L2 JASPAR yes 63739159
chr5 80258679 80258695 SOX4 JASPAR yes 63739160
Genes associated with rs143050025[chr5:80258679], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More