EnhancerDB
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  3. rs143062180[chr17:79702002]
Enhancers that have rs143062180[chr17:79702002]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79687096 79705379 enh17447
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs143062180[chr17:79702002]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79697872 79702757 TCF7L2 GTRD no Colon (HCT116) 21798308
chr17 79697872 79702757 TCF7L2 GTRD no Colon (HCT116) 108310128
chr17 79698203 79702705 TCF7L2 GTRD no Colon (HCT116) 21798310
chr17 79698203 79702705 TCF7L2 GTRD no Colon (HCT116) 108310134
chr17 79698921 79702115 TCF7L2 GTRD no Colon (HCT116) 21798320
chr17 79701595 79702799 ZNF143 GTRD no Epithelial (MCF-7) 21798352
chr17 79701635 79702695 TCF7L2 GTRD no Colon (HCT116) 21798353
chr17 79701635 79704037 TCF7L2 GTRD no Colon (HCT116) 21798354
chr17 79701665 79702739 ZNF143 GTRD no Epithelial (MCF-7) 21798355
chr17 79701672 79702616 ZNF143 GTRD no Epithelial (MCF-7) 21798356
chr17 79701674 79702466 ZNF143 GTRD no Epithelial (MCF-7) 21798357
chr17 79701685 79702882 ZNF143 GTRD no Epithelial (MCF-7) 21798358
chr17 79701690 79702506 ZNF143 GTRD no Epithelial (MCF-7) 21798359
chr17 79701698 79702710 ZNF143 GTRD no Epithelial (MCF-7) 21798360
chr17 79701711 79702510 ZNF143 GTRD no Epithelial (MCF-7) 21798361
chr17 79701756 79702480 ZNF274 GTRD no Cervix (HeLa-S3) 21798362
chr17 79701793 79702290 TCF7L2 GTRD no Colon (HCT116) 21798363
chr17 79701808 79702118 ZNF274 GTRD no Liver (HepG2) 21798364
chr17 79701821 79702337 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21798365
chr17 79701908 79702417 ZNF143 GTRD no Epithelial (MCF-7) 21798366
chr17 79701919 79703589 TCF7L2 GTRD no Colon (HCT116) 21798367
chr17 79701934 79702411 ZNF274 GTRD no Cervix (HeLa-S3) 21798368
chr17 79701937 79702318 ZNF143 GTRD no Epithelial (MCF-7) 21798369
chr17 79701945 79702321 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21798370
chr17 79701961 79702372 ZNF274 GTRD no Liver (HepG2) 21798371
chr17 79701992 79702003 E2F4 JASPAR yes 56340876
chr17 79701992 79702003 E2F6 JASPAR yes 56340877
chr17 79701993 79702004 E2F1 JASPAR yes 56340878
chr17 79701998 79702377 ZNF274 GTRD no Liver (HepG2) 21798372
Genes associated with rs143062180[chr17:79702002], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More