EnhancerDB
  1. Home
  2. SNP
  3. rs143081871[chr12:50612558]
Enhancers that have rs143081871[chr12:50612558]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50600876 50615015 enh2345
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Lung (A549) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Stomach Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs143081871[chr12:50612558]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50612558 50612566 TBX5 JASPAR yes 120819923
chr12 50612558 50612567 ZEB1 JASPAR yes 120819924
chr12 50612558 50612573 SCRT1 JASPAR yes 120819925
Genes associated with rs143081871[chr12:50612558], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More