EnhancerDB
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  3. rs143088520[chr1:36631052]
Enhancers that have rs143088520[chr1:36631052]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 36623405 36636370 enh239
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Heart
Transcript factors that have rs143088520[chr1:36631052]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 36631038 36631059 IRF1 JASPAR yes 28122384
chr1 36631044 36631065 IRF1 JASPAR yes 28122385
chr1 36631045 36631060 FOXP1 JASPAR yes 28122386
chr1 36631047 36631068 IRF1 JASPAR yes 28122387
chr1 36631048 36631069 IRF1 JASPAR yes 28122388
chr1 36631049 36631064 FOXP1 JASPAR yes 28122389
chr1 36631049 36631070 IRF1 JASPAR yes 28122390
Genes associated with rs143088520[chr1:36631052], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More