EnhancerDB
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  3. rs143135816[chr17:70395676]
Enhancers that have rs143135816[chr17:70395676]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs143135816[chr17:70395676]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70395579 70396246 EP300 UCSC Txn Factor no Conserved 108289837
chr17 70395595 70396065 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21784530
chr17 70395595 70396065 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108289838
chr17 70395617 70396241 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21784531
chr17 70395617 70396241 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108289839
chr17 70395617 70396775 TCF7L2 UCSC Txn Factor no Conserved 108289840
chr17 70395634 70396230 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21784532
chr17 70395634 70396230 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108289841
chr17 70395663 70396220 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21784533
chr17 70395663 70396220 NFIC UCSC Txn Factor no Conserved 108289842
chr17 70395663 70396220 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108289843
chr17 70395667 70395677 SP1 JASPAR yes 55783276
chr17 70395668 70395689 ZNF263 JASPAR yes 55783277
chr17 70395669 70395681 INSM1 JASPAR yes 55783279
chr17 70395675 70395696 ZNF263 JASPAR yes 55783280
chr17 70395676 70395680 LFA1 TRANSFAC yes 55783281
Genes associated with rs143135816[chr17:70395676], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More