EnhancerDB
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  3. rs143180062[chr18:56233660]
Enhancers that have rs143180062[chr18:56233660]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56213245 56242835 enh4870
Astrocyte Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs143180062[chr18:56233660]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56233653 56233666 DUXA JASPAR yes 110960304
chr18 56233654 56233665 DUX4 JASPAR yes 110960305
chr18 56233654 56233665 PHOX2A JASPAR yes 110960306
chr18 56233655 56233660 NFY TRANSFAC yes 110960307
Genes associated with rs143180062[chr18:56233660], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More