EnhancerDB
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  3. rs143187206[chr17:53525603]
Enhancers that have rs143187206[chr17:53525603]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs143187206[chr17:53525603]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53525470 53525988 ZNF274 GTRD no Liver (HepG2) 21772671
chr17 53525472 53526030 ZNF274 GTRD no Liver (HepG2) 21772672
chr17 53525473 53526071 ZNF274 GTRD no Liver (HepG2) 21772673
chr17 53525598 53525614 POU4F3 JASPAR yes 54852185
chr17 53525600 53525614 POU4F1 JASPAR yes 54852186
chr17 53525602 53525618 POU4F3 JASPAR yes 54852187
chr17 53525603 53525618 FOXA1 JASPAR yes 54852188
Genes associated with rs143187206[chr17:53525603], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More