EnhancerDB
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  3. rs143233684[chr5:174800052]
Enhancers that have rs143233684[chr5:174800052]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 174798965 174816415 enh38688
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Lung (A549) Muscle (A673) Colon (HCT116) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs143233684[chr5:174800052]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 174800044 174800054 HOXA13 JASPAR yes 68000827
chr5 174800044 174800054 HOXB13 JASPAR yes 68000828
chr5 174800044 174800054 HOXD13 JASPAR yes 68000829
chr5 174800048 174800059 PHOX2A JASPAR yes 68000830
chr5 174800048 174800059 PROP1 JASPAR yes 68000831
Genes associated with rs143233684[chr5:174800052], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More