EnhancerDB
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  3. rs143306381[chr19:12896791]
Enhancers that have rs143306381[chr19:12896791]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 12880762 12907555 enh5013
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Placenta Blood (Karpas-422) Muscle (Myoblast) Uterus Blood (T-cell)
Transcript factors that have rs143306381[chr19:12896791]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 12895913 12897618 ZNF143 GTRD no Epithelial (MCF-7) 108386394
chr19 12895913 12897618 ZNF143 GTRD no Epithelial (MCF-7) 108386395
chr19 12895913 12897618 ZNF143 GTRD no Epithelial (MCF-7) 108386396
chr19 12896109 12898236 TCF7L2 GTRD no Colon (HCT116) 108386407
chr19 12896109 12898236 TCF7L2 GTRD no Colon (HCT116) 108386408
chr19 12896109 12898236 TCF7L2 GTRD no Colon (HCT116) 108386409
chr19 12896116 12896844 ZNF274 GTRD no Blood (GM12878) 108386410
chr19 12896116 12896844 ZNF274 GTRD no Blood (GM12878) 108386411
chr19 12896196 12897007 ZNF274 GTRD no Blood (GM12878) 108386414
chr19 12896196 12897007 ZNF274 GTRD no Blood (GM12878) 108386415
chr19 12896229 12896815 ZNF274 GTRD no Blood (GM12878) 108386416
chr19 12896235 12896974 ZNF274 GTRD no Blood (GM12878) 108386417
chr19 12896235 12896974 ZNF274 GTRD no Blood (GM12878) 108386418
chr19 12896276 12896875 ZNF274 GTRD no Blood (GM12878) 108386419
chr19 12896276 12896875 ZNF274 GTRD no Blood (GM12878) 108386420
chr19 12896308 12896875 ZNF274 GTRD no Blood (GM12878) 108386421
chr19 12896308 12896875 ZNF274 GTRD no Blood (GM12878) 108386422
chr19 12896362 12897916 ZNF274 GTRD no Blood (GM12878) 108386423
chr19 12896362 12897916 ZNF274 GTRD no Blood (GM12878) 108386424
chr19 12896395 12896883 ZNF274 GTRD no Blood (GM12878) 108386426
chr19 12896395 12896883 ZNF274 GTRD no Blood (GM12878) 108386427
chr19 12896665 12897279 TCF7L2 GTRD no Colon (HCT116) 108386432
chr19 12896665 12897279 TCF7L2 GTRD no Colon (HCT116) 108386433
chr19 12896688 12897284 TCF7L2 GTRD no Colon (HCT116) 108386434
chr19 12896688 12897284 TCF7L2 GTRD no Colon (HCT116) 108386435
chr19 12896690 12897194 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21849885
chr19 12896690 12897194 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108386436
chr19 12896690 12897194 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108386437
chr19 12896783 12896795 TFAP2A JASPAR yes 112493927
chr19 12896783 12896795 TFAP2B JASPAR yes 112493928
chr19 12896783 12896795 TFAP2C JASPAR yes 112493929
Genes associated with rs143306381[chr19:12896791], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr19 11998599 12025144 + ZNF69 ENSG00000198429.5 11998599 871647 Pancreas 0.183591 17057