EnhancerDB
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  3. rs143346828[chr1:25358548]
Enhancers that have rs143346828[chr1:25358548]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25355194 25369035 enh149
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Thymus Stomach
Transcript factors that have rs143346828[chr1:25358548]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25357021 25361651 POLR2A UCSC Txn Factor no Conserved 107802494
chr1 25357021 25361651 POLR2A UCSC Txn Factor no Conserved 107802495
chr1 25358547 25358555 USF1 TRANSFAC yes 27556027
chr1 25358547 25358560 NR2F1 JASPAR yes 27556028
Genes associated with rs143346828[chr1:25358548], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More