EnhancerDB
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  3. rs143381018[chr1:172884077]
Enhancers that have rs143381018[chr1:172884077]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs143381018[chr1:172884077]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172882070 172886039 ZNF274 GTRD no Bone Marrow (K562) 107846255
chr1 172883130 172884232 ZNF274 GTRD no Blood (GM12878) 107846258
chr1 172884073 172884084 ETV2 JASPAR yes 33165646
chr1 172884073 172884084 SPDEF JASPAR yes 33165647
chr1 172884075 172884080 GATA2 JASPAR yes 33165648
Genes associated with rs143381018[chr1:172884077], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More