EnhancerDB
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  3. rs143402516[chr2:236428687]
Enhancers that have rs143402516[chr2:236428687]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 236405325 236429424 enh19364
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs143402516[chr2:236428687]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 236428677 236428692 ZIC3 JASPAR yes 81977562
chr2 236428683 236428687 H1TF2 TRANSFAC yes 81977563
chr2 236428683 236428687 NFE TRANSFAC yes 81977564
chr2 236428683 236428687 SRF TRANSFAC yes 81977565
Genes associated with rs143402516[chr2:236428687], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More