EnhancerDB
  1. Home
  2. SNP
  3. rs143434960[chr2:238361959]
Enhancers that have rs143434960[chr2:238361959]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238336205 238371002 enh19393
Brain (SK-N-MC) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs143434960[chr2:238361959]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238361954 238361962 TBX5 JASPAR yes 82111270
chr2 238361954 238361963 ZEB1 JASPAR yes 82111271
chr2 238361956 238361965 SNAI2 JASPAR yes 82111272
chr2 238361957 238361962 USF2 TRANSFAC yes 82111273
Genes associated with rs143434960[chr2:238361959], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More