EnhancerDB
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  3. rs143500430[chr17:53524274]
Enhancers that have rs143500430[chr17:53524274]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs143500430[chr17:53524274]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53524026 53524590 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772652
chr17 53524043 53524608 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772654
chr17 53524094 53524370 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772655
chr17 53524096 53524720 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772656
chr17 53524101 53524476 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772657
chr17 53524107 53524367 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772658
chr17 53524132 53524422 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772659
chr17 53524132 53524523 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772660
chr17 53524140 53524535 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772661
chr17 53524143 53524474 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772662
chr17 53524146 53524526 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772663
chr17 53524175 53524300 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772664
chr17 53524175 53524365 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772665
chr17 53524186 53524488 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772666
chr17 53524259 53524274 FOXA1 JASPAR yes 54851971
chr17 53524259 53524559 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772667
chr17 53524260 53524275 FOXP1 JASPAR yes 54851972
chr17 53524263 53524274 FOXA1 JASPAR yes 54851975
chr17 53524263 53524281 IRF2 JASPAR yes 54851976
chr17 53524273 53524371 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772668
Genes associated with rs143500430[chr17:53524274], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More