EnhancerDB
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  3. rs143519532[chr1:202031959]
Enhancers that have rs143519532[chr1:202031959]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs143519532[chr1:202031959]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202031265 202032047 ZNF143 GTRD no Epithelial (MCF-7) 21366208
chr1 202031301 202032120 ZNF274 GTRD no Bone Marrow (K562) 21366209
chr1 202031644 202032267 ZNF274 GTRD no Liver (HepG2) 21366211
chr1 202031672 202032291 ZNF274 GTRD no Liver (HepG2) 21366212
chr1 202031687 202032225 ZNF274 GTRD no Liver (HepG2) 21366213
chr1 202031700 202032341 ZNF274 GTRD no Liver (HepG2) 21366214
chr1 202031836 202032173 ZNF274 GTRD no Liver (HepG2) 21366215
chr1 202031857 202032202 ZNF274 GTRD no Liver (HepG2) 21366216
chr1 202031884 202032145 ZNF274 GTRD no Liver (HepG2) 21366217
chr1 202031955 202031968 EOMES JASPAR yes 34548099
chr1 202031957 202031961 ESR1 TRANSFAC yes 34548100
chr1 202031957 202031967 TBR1 JASPAR yes 34548101
chr1 202031958 202031968 TBX21 JASPAR yes 34548102
chr1 202031959 202031967 MGA JASPAR yes 34548103
chr1 202031959 202031967 TBX15 JASPAR yes 34548104
chr1 202031959 202031967 TBX1 JASPAR yes 34548105
chr1 202031959 202031967 TBX4 JASPAR yes 34548106
chr1 202031959 202031967 TBX5 JASPAR yes 34548107
chr1 202031959 202031968 ZEB1 JASPAR yes 34548108
chr1 202031959 202031974 SCRT1 JASPAR yes 34548109
Genes associated with rs143519532[chr1:202031959], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More