EnhancerDB
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  3. rs143558241[chr1:235268468]
Enhancers that have rs143558241[chr1:235268468]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235261105 235271828 enh998
Skin (Keratinocyte) Prostate (RWPE1) Ovary Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus
Transcript factors that have rs143558241[chr1:235268468]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235268331 235268927 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403744
chr1 235268403 235268813 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403745
chr1 235268431 235268841 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403746
chr1 235268449 235268719 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403747
chr1 235268457 235268472 SOX21 JASPAR yes 36352935
Genes associated with rs143558241[chr1:235268468], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More