EnhancerDB
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  3. rs143562078[chr16:85483022]
Enhancers that have rs143562078[chr16:85483022]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85477350 85511195 enh16870
Bone Marrow (K562) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs143562078[chr16:85483022]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85482648 85483253 ZNF143 GTRD no Epithelial (MCF-7) 21726068
chr16 85482670 85483326 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21726070
chr16 85482751 85483248 ZNF274 GTRD no Bone Marrow (K562) 21726071
chr16 85482769 85483297 ZNF274 GTRD no Bone Marrow (K562) 21726072
chr16 85483009 85483023 PLAG1 JASPAR yes 12062522
chr16 85483020 85483027 SP1 TRANSFAC yes 12062523
chr16 85483020 85483030 SP1 JASPAR yes 12062524
chr16 85483021 85483029 SP1 TRANSFAC yes 12062525
chr16 85483021 85483030 SP1 TRANSFAC yes 12062526
chr16 85483021 85483031 SP1 JASPAR yes 12062527
chr16 85483022 85483027 SP1 TRANSFAC yes 12062528
chr16 85483022 85483033 E2F4 JASPAR yes 12062529
Genes associated with rs143562078[chr16:85483022], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More