EnhancerDB
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  3. rs143569004[chr17:55688276]
Enhancers that have rs143569004[chr17:55688276]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55673238 55692440 enh4492
Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs143569004[chr17:55688276]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55688267 55688287 RREB1 JASPAR yes 54975170
chr17 55688270 55688290 RREB1 JASPAR yes 54975171
chr17 55688271 55688277 TCF4 TRANSFAC yes 54975172
chr17 55688272 55688292 RREB1 JASPAR yes 54975173
chr17 55688274 55688294 RREB1 JASPAR yes 54975174
Genes associated with rs143569004[chr17:55688276], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More