EnhancerDB
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  3. rs143594504[chr5:171539758]
Enhancers that have rs143594504[chr5:171539758]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171526400 171541439 enh8877
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Prostate (RWPE1) Lung Heart
Transcript factors that have rs143594504[chr5:171539758]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171539744 171539765 IRF1 JASPAR yes 67763723
chr5 171539745 171539760 SOX21 JASPAR yes 67763724
chr5 171539746 171539761 PRDM1 JASPAR yes 67763725
chr5 171539752 171539773 IRF1 JASPAR yes 67763726
chr5 171539758 171539773 FOXP1 JASPAR yes 67763727
Genes associated with rs143594504[chr5:171539758], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More