EnhancerDB
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  3. rs143619539[chr1:28483954]
Enhancers that have rs143619539[chr1:28483954]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28477646 28492815 enh183
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Ovary Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs143619539[chr1:28483954]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28483953 28483961 MGA JASPAR yes 27747690
chr1 28483953 28483961 TBX15 JASPAR yes 27747691
chr1 28483953 28483961 TBX1 JASPAR yes 27747692
chr1 28483953 28483961 TBX4 JASPAR yes 27747693
chr1 28483953 28483961 TBX5 JASPAR yes 27747694
chr1 28483953 28483966 SMAD2 JASPAR yes 27747695
Genes associated with rs143619539[chr1:28483954], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More