EnhancerDB
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  3. rs143621577[chr1:212659014]
Enhancers that have rs143621577[chr1:212659014]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212648565 212664795 enh12641
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs143621577[chr1:212659014]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212658924 212659648 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107868450
chr1 212658949 212659349 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107868451
chr1 212658955 212659231 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21378858
chr1 212658955 212659231 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107868452
chr1 212658996 212659015 REST JASPAR yes 35128959
chr1 212659014 212659024 NKX2-3 JASPAR yes 35128960
Genes associated with rs143621577[chr1:212659014], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More