EnhancerDB
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  3. rs143629549[chr1:25024119]
Enhancers that have rs143629549[chr1:25024119]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25002143 25025115 enh11624
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs143629549[chr1:25024119]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25017256 25025212 ZNF274 GTRD no Blood (GM12878) 107802463
chr1 25017364 25039918 ZNF274 GTRD no Blood (GM12878) 21325292
chr1 25024111 25024129 NFYA JASPAR yes 27519659
chr1 25024114 25024130 NFYA JASPAR yes 27519660
chr1 25024117 25024132 NFYB JASPAR yes 27519661
chr1 25024119 25024124 NFY TRANSFAC yes 27519662
Genes associated with rs143629549[chr1:25024119], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More