EnhancerDB
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  3. rs143653013[chr16:88333724]
Enhancers that have rs143653013[chr16:88333724]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88327201 88357367 enh16902
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus
Transcript factors that have rs143653013[chr16:88333724]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88329349 88336233 ZBTB33 GTRD no Lung (A549) 21735886
chr16 88329477 88337057 ZBTB33 GTRD no Lung (A549) 21735887
chr16 88329704 88335103 ZBTB33 GTRD no Lung (A549) 21735888
chr16 88330491 88335363 ZBTB33 GTRD no Lung (A549) 21735893
chr16 88330871 88335390 ZNF274 GTRD no Cervix (HeLa-S3) 21735896
chr16 88331628 88334100 ZBTB33 GTRD no Lung (A549) 21735904
chr16 88331705 88333751 ZBTB33 GTRD no Lung (A549) 21735906
chr16 88331737 88333849 ZBTB33 GTRD no Lung (A549) 21735911
chr16 88331745 88333970 ZNF274 GTRD no Cervix (HeLa-S3) 21735912
chr16 88333432 88333802 ZNF274 GTRD no Cervix (HeLa-S3) 21735975
chr16 88333441 88333725 ZBTB33 GTRD no Lung (A549) 21735976
chr16 88333442 88335014 ZBTB33 GTRD no Lung (A549) 21735977
chr16 88333461 88334931 ZBTB33 GTRD no Lung (A549) 21735978
chr16 88333463 88334211 ZNF274 GTRD no Cervix (HeLa-S3) 21735979
chr16 88333466 88334825 ZBTB33 GTRD no Lung (A549) 21735980
chr16 88333467 88335197 ZBTB33 GTRD no Lung (A549) 21735981
chr16 88333474 88334734 ZBTB33 GTRD no Lung (A549) 21735982
chr16 88333478 88334177 ZBTB33 GTRD no Lung (A549) 21735983
chr16 88333719 88333740 IRF1 JASPAR yes 12275552
chr16 88333723 88333737 STAT1 JASPAR yes 12275553
chr16 88333723 88333738 PRDM1 JASPAR yes 12275554
chr16 88333723 88333738 STAT2 JASPAR yes 12275555
chr16 88333723 88333741 IRF2 JASPAR yes 12275556
Genes associated with rs143653013[chr16:88333724], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More