EnhancerDB
  1. Home
  2. SNP
  3. rs143665543[chr1:9621309]
Enhancers that have rs143665543[chr1:9621309]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9595905 9627275 enh49
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs143665543[chr1:9621309]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9621304 9621310 TCF4 TRANSFAC yes 26662286
chr1 9621304 9621319 FOXP1 JASPAR yes 26662287
chr1 9621305 9621316 FOXP2 JASPAR yes 26662288
chr1 9621305 9621317 FOXC2 JASPAR yes 26662289
Genes associated with rs143665543[chr1:9621309], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More